vndk-def: Improve diagnostics for --load-extra-deps

After this commit, vndk_definition_tool.py will print the line number
and the file name (specified in --load-extra-deps command line option)
if the source or destination does not match any shared objects.

Test: ./tests/run.py
Change-Id: Idd41c405c13fc232c2db8d12278e0828392aae62